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page_id: component-component:engine/src page_type: component generation_mode: inferred freshness_status: reused updated_at: 2026-07-06T01:45:03.695Z

<details> <summary>Build metadata</summary> 
{
  "freshnessKey": "a0fed99ead859b737e7044288a8238a77a70e6ca",
  "plannerReason": "Generated because the component was ranked as significant for repo navigation.",
  "changedPaths": [],
  "dependencyPaths": [
    "engine/src/helix/cuda/fields/composite_editability.cu",
    "engine/src/helix/cuda/fields/dcas9_occupancy.cu",
    "engine/src/helix/cuda/fields/gc_homopolymer.cu",
    "engine/src/helix/cuda/fields/indel_risk.cu",
    "engine/src/helix/cuda/fields/offtarget_density.cu",
    "engine/src/helix/cuda/fields/pam_seed.cu",
    "engine/src/helix/cuda/fields/prime_dp.cu",
    "pyproject.toml"
  ],
  "dependencyEvidenceIds": [
    "ingest:file:engine/src/helix/cuda/fields/composite_editability.cu",
    "ingest:file:engine/src/helix/cuda/fields/dcas9_occupancy.cu",
    "ingest:file:engine/src/helix/cuda/fields/gc_homopolymer.cu",
    "ingest:file:engine/src/helix/cuda/fields/indel_risk.cu",
    "ingest:file:engine/src/helix/cuda/fields/offtarget_density.cu",
    "ingest:file:engine/src/helix/cuda/fields/pam_seed.cu",
    "ingest:file:engine/src/helix/cuda/fields/prime_dp.cu",
    "workflow:pyproject.toml"
  ],
  "evidenceIds": [
    "ingest:file:engine/src/helix/cuda/fields/composite_editability.cu",
    "ingest:file:engine/src/helix/cuda/fields/dcas9_occupancy.cu",
    "ingest:file:engine/src/helix/cuda/fields/gc_homopolymer.cu",
    "ingest:file:engine/src/helix/cuda/fields/indel_risk.cu",
    "ingest:file:engine/src/helix/cuda/fields/offtarget_density.cu",
    "ingest:file:engine/src/helix/cuda/fields/pam_seed.cu",
    "ingest:file:engine/src/helix/cuda/fields/prime_dp.cu",
    "workflow:pyproject.toml"
  ],
  "qualityWarnings": []
}
</details>

engine/src

Source module rooted at engine/src.

Implementation Roles

Insufficient evidence to infer implementation roles confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Module Responsibilities

Insufficient evidence to infer module responsibilities confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Key Symbols

Insufficient evidence to infer key symbol behavior confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

State Boundaries

Insufficient evidence to infer state boundaries confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

State Ownership and Handoffs

Insufficient evidence to infer state ownership and handoffs confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Request Lifecycle

Insufficient evidence to infer a bounded request lifecycle confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Responsibilities

Source module rooted at engine/src.

Type: module Root path: engine/src Ecosystem: unknown

<details> <summary>Related files:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • engine/src/helix/cuda/fields/indel_risk.cu
  • engine/src/helix/cuda/fields/offtarget_density.cu
  • engine/src/helix/cuda/fields/pam_seed.cu
  • engine/src/helix/cuda/fields/prime_dp.cu
</details> <details> <summary>Citations:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • engine/src/helix/cuda/fields/indel_risk.cu
</details>

Entrypoints and Runtime Surface

  • none

Interfaces and Config

  • none

Dependencies and Relationships

  • none
<details> <summary>Related files:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • engine/src/helix/cuda/fields/indel_risk.cu
  • engine/src/helix/cuda/fields/offtarget_density.cu
  • engine/src/helix/cuda/fields/pam_seed.cu
  • engine/src/helix/cuda/fields/prime_dp.cu
</details> <details> <summary>Citations:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • engine/src/helix/cuda/fields/indel_risk.cu
</details>

Why This Hotspot Matters

Insufficient evidence to explain this component as a hotspot confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Operational Risk Surface

Insufficient evidence to infer operational risk surface confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Invariants and Failure Handling

Insufficient evidence to infer invariants and failure handling confidently.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Where to Edit

Likely change entry files:

  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu

Owned interfaces:

  • none

Nearby verification surfaces:

  • Validate with python -m pytest (test) from ..
<details> <summary>Supporting citations:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • pyproject.toml
</details> <details> <summary>Related files:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • pyproject.toml
</details> <details> <summary>Citations:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • pyproject.toml
</details>

Change Planning

Insufficient evidence to infer change-planning guidance.

<details> <summary>Supporting citations:</summary>
  • none
</details>

Nearby Workflows

  • none

Citations

<details> <summary>Citations:</summary>
  • engine/src/helix/cuda/fields/composite_editability.cu
  • engine/src/helix/cuda/fields/dcas9_occupancy.cu
  • engine/src/helix/cuda/fields/gc_homopolymer.cu
  • engine/src/helix/cuda/fields/indel_risk.cu
  • pyproject.toml
</details>